FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17158875
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG132700.010.14691394-95
CGTATGC165450.09.73161194-95
TCGTATG180200.09.39629394-95
ATGCCGT135450.08.95908594-95
GTATGCC173800.08.71751594-95
CTCGTAT200650.08.69901394-95
ATCTCGT255850.08.0566894-95
TCTCGTA223950.08.00603994-95
GCCGTCT129450.07.94342294-95
CCGTCTT122300.07.708783694-95
TGCCGTC145050.07.514788694-95
CATCTCG306450.07.377328494-95
AGACATC423100.06.634317494-95
ACGCCAA611000.06.55685694-95
CGCCAAG594500.06.33538794-95
GACATCT408550.06.20794594-95
CAAGACA547200.06.20694-95
CCAAGAC579450.06.163872794-95
AAGACAT470950.06.13169594-95
GTCACGC747950.06.08655294-95
Produced by FastQC (version 0.11.5)