FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16944633
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG123700.010.75077194-95
TCGTATG168800.09.4962694-95
CGTATGC153550.09.48051494-95
ATGCCGT131850.09.005568594-95
CTCGTAT187150.08.97120794-95
GTATGCC166450.08.50322594-95
TCTCGTA210300.08.4805194-95
ATCTCGT241650.08.22545494-95
CATCTCG290150.07.488929794-95
TGCCGTC138250.07.437791394-95
GCCGTCT123600.07.435560794-95
CCGTCTT116650.07.10496594-95
ACGCCAA575250.06.62169294-95
AGACATC408600.06.422219894-95
CGCCAAG558550.06.39025594-95
ACATCTC375800.06.287638794-95
GACATCT394500.06.236400694-95
CACGCCA663150.06.06270594-95
CCAAGAC553150.06.001855494-95
AGTCACG743800.05.948095394-95
Produced by FastQC (version 0.11.5)