FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11880503
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG70850.010.12246794-95
CGTATGC90600.09.88171694-95
TCGTATG100550.09.37621894-95
CTCGTAT110850.09.0191594-95
TCTCGTA124850.08.73058694-95
ATGCCGT80350.08.57099894-95
ATCTCGT146550.08.37768494-95
AATCTCG158350.08.21829594-95
GTATGCC103050.08.18087294-95
GCCGTCT73550.08.16877894-95
TCGAATC194000.08.09131294-95
TGCCGTC84700.07.99062494-95
CGAATCT180600.07.92900794-95
CCGTCTT69600.07.67701794-95
TTCGAAT215000.07.488769594-95
CTTCGAA249050.07.237264694-95
ACTTCGA272800.06.998918594-95
GTAGAGA113350.06.9084511
GTTCGAT8509.1490307E-46.74094341
GAATCTC209200.06.697451694-95
Produced by FastQC (version 0.11.5)