FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13668481
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC108950.010.65871894-95
TCGTATG120700.010.52615694-95
TATGCCG85300.09.91115694-95
CTCGTAT134000.09.37506394-95
TCTCGTA151400.09.05051494-95
ATGCCGT89800.08.96492694-95
AATCTCG188600.08.86450194-95
ATCTCGT176350.08.79348594-95
GTATGCC117200.08.38872694-95
GACTAGT352700.07.493988594-95
ACTAGTA330550.07.32083194-95
TAATCTC240000.07.272762394-95
CGACTAG373350.07.27031894-95
CTAGTAA308500.07.251353394-95
AGTAATC260300.07.216483694-95
GTAATCT244400.07.16126394-95
TAGTAAT284500.07.06173594-95
TGCCGTC100350.06.933836594-95
ACGACTA406750.06.784250794-95
CACGACT451800.06.60712394-95
Produced by FastQC (version 0.11.5)