FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13790095
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG54500.010.15206494-95
TCGTATG76300.010.02135294-95
CGTATGC67900.09.93215794-95
CTCGTAT84250.09.86490994-95
TCTCGTA97300.08.6150394-95
ATGCCGT63050.07.98446394-95
ATCTCGT114400.07.34805294-95
GTATGCC83250.07.159528794-95
ATGAATC242250.06.616601594-95
CATCTCG149200.06.47769694-95
CGATGAA250050.06.45768894-95
GTCACGA318950.06.38792394-95
AGTCACG347900.06.32732794-95
ACGATGA278800.06.23466794-95
TCACGAT298000.06.19155594-95
TGAATCA240700.06.126472594-95
GATGAAT279550.06.03955794-95
AATCATC198550.05.884237394-95
TGCCGTC74050.05.8363594-95
GAATCAT207750.05.81797394-95
Produced by FastQC (version 0.11.5)