FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13726466
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG69350.09.96466194-95
CTCGTAT104850.09.60314494-95
TCGTATG92550.09.21157794-95
CGTATGC85350.09.098394-95
TCTCGTA120050.08.44659694-95
GTATGCC98700.08.37294394-95
ATGCCGT76050.07.587925494-95
ATCTCGT139350.07.447156494-95
AATCTCG146750.07.427635794-95
CTAAATC207900.07.001998494-95
TGCCTAA268700.06.53119794-95
GCCGTCT79100.06.514772494-95
GCCTAAA246400.06.399461394-95
TAAATCT224800.06.36996594-95
TGCCGTC88650.06.24156194-95
ATGCCTA298050.06.095205394-95
CCGTCTT74200.06.0808794-95
CCTAAAT233550.06.060070592-93
ACATGCC363000.05.41676294-95
AAATCTC226150.05.32386994-95
Produced by FastQC (version 0.11.5)