FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23130211
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAAGT399100.07.40036152
CCCTAAA113450.07.398421
CCCAAAG463550.07.3876631
CCCAAAA209250.06.44089561
AAAGTGC343000.06.42590334
CCCAAAT182700.06.3793021
CCCTAAT68200.06.3294151
CAAAGTG409350.06.2198563
CCCATAA84150.06.1556661
CCCGAGT96700.06.15036151
CCATAAA128050.05.9555651
AAGTGCT382650.05.88288355
CCTTAAA134150.05.82776931
CCCGAAA44500.05.8202171
CTCGTAT32800.05.719326594-95
CCCAATT95700.05.71344851
CCAGAAA306850.05.67395541
CCCAAGT199550.05.64834931
CCCCGGT67750.05.5927221
CCGAGTA58800.05.58103662
Produced by FastQC (version 0.11.5)