FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23130211
Sequences flagged as poor quality0
Sequence length101
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAGT91050.06.57836631
CCCAAAT178550.06.2222051
CCCAAAG406950.06.01787571
CCCTAAA108700.05.86571171
CCGAGTA58400.05.85751722
GGCTAAT126750.05.79257871
CGAGTAG50450.05.64993763
CCAAAGT338650.05.56972032
CGCCGTA26650.05.524215794-95
CCCTAAT66900.05.48736431
CCCAAGT192600.05.3419481
CCCAAAA195350.05.31620071
CCTTAAA130250.05.30315881
CCTAAAA156050.05.29308271
CCCGAAT31354.274625E-105.08455231
CCCGCAA48000.05.0315881
TCGTGTA187850.05.005645894-95
Produced by FastQC (version 0.11.5)