FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12416798
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG152550.011.09970794-95
ATGCCGT144500.010.501883594-95
TCGTATG217800.010.08597994-95
CGTATGC194800.010.06990294-95
TGCCGTC143200.09.91727594-95
GTATGCC191300.09.869394-95
GCCGTCT126800.09.66417294-95
CTCGTAT242150.09.54250994-95
CCGTCTT114900.09.2389394-95
TCTCGTA266250.08.85714694-95
ATCTCGT299500.08.53197794-95
TATCTCG314350.08.38578594-95
CGTCTTC122000.08.13674494-95
ATATCTC374500.07.66036294-95
GATATCT403800.07.580994-95
TGATATC441400.07.41935594-95
GTGATAT477400.07.04890594-95
CGTGATA505050.06.99215194-95
AACGTGA610300.06.68519394-95
ACGTGAT559500.06.66398194-95
Produced by FastQC (version 0.11.5)