FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12416798
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA133750.011.54146494-95
CCGTATC156550.010.87695794-95
GCCGTAT174250.010.86242794-95
GTATCAT141150.010.22972794-95
CGCCGTA193700.09.99238994-95
TCGCCGT226050.09.67601394-95
GTCGCCG261100.09.05018794-95
GGTCGCC289550.08.66127294-95
TGGTCGC309050.08.53741994-95
TATCATT148600.08.39038494-95
ATCATTA131600.08.31929294-95
GTGGTCG348050.08.04476794-95
TCATTAA133900.07.679777694-95
CGGTGGT433100.07.33684394-95
TCGGTGG468900.07.323680494-95
CATTAAA132850.07.15055594-95
GGTGGTC445200.06.870716694-95
CTCGGTG520900.06.84333394-95
TCTCGGT533900.06.752322794-95
GATCTCG643600.06.306194394-95
Produced by FastQC (version 0.11.5)