FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004969930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004969930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12668393
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG148950.011.31923194-95
ATGCCGT142350.011.00995494-95
CGTATGC191350.010.46160294-95
GTATGCC188800.010.06206394-95
TGCCGTC138750.09.94356794-95
CCGTCTT111900.09.61318394-95
TCGTATG212650.09.57005794-95
CTCGTAT233700.09.28723794-95
TCTCGTA258550.09.25795594-95
GCCGTCT120450.09.18709594-95
ATCTCGT296250.09.05772694-95
TATCTCG310850.08.73161194-95
CGTCTTC119650.08.196650594-95
ATATCTC375150.08.03259394-95
GATATCT402800.07.83492194-95
TGATATC438800.07.381537494-95
CGTGATA508400.07.123007394-95
GTGATAT479250.07.001306594-95
ACGTGAT560900.06.701847694-95
AACGTGA610950.06.525955794-95
Produced by FastQC (version 0.11.5)