FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004970892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004970892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length653-19631
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTAACTGAAAATGCTTCTGATGGCAGACAGCTGTCCTGAGTTCATGCTC13.4482758620689653No Hit
CATTGTACTTCGTTCAGTTACGTGGCTGCTGGAGTACTGCAGGAATGAAT13.4482758620689653No Hit
CAATTTGCTTCCCGTTCGGTTACATGAGTAGCTAGCTTCCCAACAGCGCT13.4482758620689653No Hit
TTGAAGAGAGGTGACAAAACAAAGGAGTATCCAACAATCTTCCCAAAGGT13.4482758620689653No Hit
TTGAAGAGGTGACCAAAACAAAGGAGTATCCAACAATCTTCCAAGGTCCT13.4482758620689653No Hit
GGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTGTCACGAGTTCATGCT13.4482758620689653No Hit
GTACTTCGTTTCGGTTACGTATTGCTTGAAACTGCAGAACACCAAAGATG13.4482758620689653No Hit
GTTGTACTTCGTTCAGTTGCATATTACTGGTGCTGCTTACTACCCAGTAG13.4482758620689653No Hit
GTTCAGTTCAGTTACGTATTGCTACAAAATAGTGTAAGAGACATAGAGGA13.4482758620689653No Hit
AGTAACTGAAAATGCTTCTAGTGGCTTGAACAGCTGTCACAGAGTTCATA13.4482758620689653No Hit
CATGCTTTGTTGGTTACGTATTTACTTTTGGTGCTGAAGCGTTTGAGCCT13.4482758620689653No Hit
CTTTCCTTGTTCAATTGTGTGCTGGTGCTGTACGCTGTAATCAAATTACA13.4482758620689653No Hit
AGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTGTCTGAGTTCATGCTC13.4482758620689653No Hit
TTGAAGGTGGCTCAAAACAAAGGAGTATCCAACAATCTTCCCAAGGTCCT13.4482758620689653No Hit
TTGAAGAAAGTGACAGCAAAACAAGGGGAGTAGTATCAACAATCTTCCCA13.4482758620689653No Hit
CAAACTACTTCGTTCCGAGTTACGTATTGCTATATTTTTAATTTTAAGTA13.4482758620689653No Hit
TTGAAGAGAGAGGTGACAAAACAAAGAGATGTCCATAATCTTCCAAGGTC13.4482758620689653No Hit
CATTGTACTTCGTTTCAGTTACATTATTGCTGGTGGCTGAAGCGTTGGCG13.4482758620689653No Hit
AGTAACTGAAATGCTTCTGGTGGCAGACAGCTGTCTGAGTTCATGCTCTC13.4482758620689653No Hit
ATTAACTGAAAATGCTTCATAGTGGCAGACAGCTGTCTGAGTTCATGCTC13.4482758620689653No Hit
TTGAAGAGAGAGGTGACAAAAAACAAAGAGGAAATGCAGGAGACCTTGAC13.4482758620689653No Hit
TTGAAAGAGGTGACAAACAAAGGTATCAGCAATCCTTTGAGTCCTGACAG13.4482758620689653No Hit
AGTAACTGAAATACTTCTAGTGGCAGACAGCTGTCTGAGTTCATGTCTGC13.4482758620689653No Hit
CAAATGCTTCGTTTCAGTTACGTATTGCTCTTGCCTGTCGCTCTATCTTC13.4482758620689653No Hit
GTTGTGCTTCGTTCAGTTGCGTATTGCTGGGGGAATGGACTTTCTGAGCA13.4482758620689653No Hit
AGTAACTGAAAATGCTTCTAGTGGCAGACAGCTGTCACAGAGTTCATGCT13.4482758620689653No Hit
TTGAAGAGGTAACAAAACAAAGTATCAACAGTCTTCAAAGTCCTGACAAG13.4482758620689653No Hit
GTTGTACTTGTTTCAGTTGCATGACTTGCTGGTGCTGGAAGCGACTGGAA13.4482758620689653No Hit
AGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTGTCACAGAGTTCATGC13.4482758620689653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)