FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004970897

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004970897
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length765-12373
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGAAGAAGTGGCAAAACAAAGGAGTATCAACAATCTTCCCAAGGTCTGA13.8461538461538463No Hit
GAAGAGGGTGACAAACAAAATGGGGTATCCAACAATCTTCAGGTCCTGAC13.8461538461538463No Hit
TTGAAGAGAGGTGACAAAACAAAGGGCAAAGGGAAATGCACAGGGAGACC13.8461538461538463No Hit
TGCTTCATTCTTCTAGTGTGACAGCTTTGTCACGTTTAGTGCTCTCTGCT13.8461538461538463No Hit
AGTAACTGAAAATGCTTCTGAAGTGGCAGACAGCTCTGTCACAGTTCATG13.8461538461538463No Hit
AGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTGTCCTGAGTTCATCTC13.8461538461538463No Hit
TTGAGAGAGTGATGAGCATAGGAGATCAACGATGCTGGATTGACAAGTGT13.8461538461538463No Hit
TTGAAGAAGTGACAAAACAAAGAAATGCAGAGGAGACATGACATCACTTT13.8461538461538463No Hit
GTTGTACTTCGTTCAGTTACGTATTGCTTGCTTAATGATAAGTATTTAAT13.8461538461538463No Hit
AATTTGTGCTTCGTTCAGTTACGTATTGCTGGTGCTGACCACTGCGTATC13.8461538461538463No Hit
TTGGTGACAAAACAAAGGGAGTATCCAACAATCTTCCCAAGGTCCTGACA13.8461538461538463No Hit
GTAGCTGAAAATCCTTCTAGGCAATAGCTGTCACGAGTTCTGCCATTACT13.8461538461538463No Hit
TTGAAGAGAGAGGTGACAAAACAAAGAAGTATCCAACAATCTTCCCAAGG13.8461538461538463No Hit
TTGAAGAGAGGTGACAAAACAAAGGGAGTATCAACAATCTTCCCAAAGGT13.8461538461538463No Hit
TTGAGAGTGACAAAACAAAGGGAGTATCAACAATCTTCCCAAGGTCCTGA13.8461538461538463No Hit
CATTACATACTTTAGTTTCAGTTCATTATTGCTCCAAGTATTTAAAAATA13.8461538461538463No Hit
CGAGTAACTGAAAATGCTTCTGAGTGGCGGTGTCACGAGTTCATATACTC13.8461538461538463No Hit
TTGAAGAGAGGTGACAAAACAAGGGAGTATCAACAATCTTCCCGAGTCCT13.8461538461538463No Hit
TTGAGAAAGGTGACAAAACAAAGGGGTATCAGCAATCTTGAGTCCTGACA13.8461538461538463No Hit
CAGTAATGCTTCGTTCCAGTTACGTATTGCTACAGCCACGGCCTGGGCCT13.8461538461538463No Hit
AGTAACTGAAAATGCTTCTAATTGGCAGACAGCTGTCCCACGGAAGGTTC13.8461538461538463No Hit
AGTAACTGAAAACAGCGCTGAGTGGCAGACAGCTGTCACAGAGTTCATGC13.8461538461538463No Hit
TGAGAAGAGGTGACCAGCGAGGGATGTCCAGCTTAATCTTCCCAAGGTCT13.8461538461538463No Hit
TTGAAGAGAGGTGGCGAAACAAAGGGAGTATCCAGCAATCTTCCCAAAGG13.8461538461538463No Hit
AGTAACTGAAAATGCTTCTAGTGGCAGACGGCTGCTCCTGAGTTCATCTC13.8461538461538463No Hit
CATGCTTCCCGTTGATTTACGTATTGCTGGTGCTTTGAGAGGTACTATGT13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)