FastQCFastQC Report
Thu 1 Sep 2022
EGAF00004970914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004970914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length112-12595
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTACCTCTCAGAGTTCAT112.5No Hit
TTGAGAGAGGTGACAAAACAAAGGAGTATCCAACAATCTTCCCAGGTCTG112.5No Hit
TTGAAGAGAGGTGACAAACAAGAGGGAGTATCCAACAATCTTCCCAAGGT112.5No Hit
AGTAACTGAAGAGTAGCTCTAAAGTGGCAACAGCTATGCAGAGTTCATAT112.5No Hit
AGTAACTGAGTGCTTCTGAGTGGCAGACAGCTGTCACAGAGTTCGTGCTC112.5No Hit
TTGAAGAGAGGGTGACAAAAACAAAGGAGTATCCAACAATCTTCCCAAGG112.5No Hit
AGTAACTGAAAATGCTTCTGAGTGGCAGACAGCTGTCACAGAGTTCATGC112.5No Hit
AGTAACTGAAAATCTTCTGAGTGGCAGGCAAGCTGTCACGAGAGTTCATG112.5No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)