FastQCFastQC Report
Mon 30 May 2022
EGAF00004972290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004972290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences362022214
Sequences flagged as poor quality0
Sequence length35-150
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN14910390.41186395263579045No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC5625570.15539295055523858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)