FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457224611
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA4638300.013.4837181
TCGGAAG4673950.013.3572512
CGGAAGA4761300.013.1373813
AGAGCAC7019650.09.2407447
AGCACAC7184750.09.02839859
GAGCACA7420850.08.7919458
GAAGAGC7783800.08.4901065
TATGCCG1524200.08.47479845-49
CGTATGC1714250.07.53016745-49
ATGCCGT1813450.07.212583545-49
GCCGTCT1853800.06.97232650-54
TGCCGTC1840650.06.961076345-49
CTCGTAT1629100.06.9208640-44
AAGAGCA10217400.06.6771176
TCTCGTA1702550.06.595888640-44
CGTCTTC2076200.06.41609750-54
TCGTATG1783550.06.252442440-44
CCGTCTT2167900.06.19486150-54
GGAAGAG11476050.06.0140084
ATCTCGT2005650.05.719811440-44
Produced by FastQC (version 0.11.5)