FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973536

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973536
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474501374
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1422950.015.6934771
TCGGAAG1586450.014.1327492
CGGAAGA1812900.012.3434383
TATGCCG618650.07.88087845-49
CGTATGC751600.06.56782445-49
CTCGTAT707550.06.212686540-44
TCTCGTA749000.05.88822340-44
AGAGCAC4516350.05.56609777
ATGCCGT932150.05.55223345-49
AGCACAC4823800.05.28649579
GCCGTCT982650.05.22967250-54
TGCCGTC961800.05.183669645-49
GAGCACA4974700.05.14940268
GAAGAGC5137800.05.07478145
Produced by FastQC (version 0.11.5)