FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478478992
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1432200.023.1089671
TCGGAAG1595150.020.872782
CGGAAGA1797450.018.5224483
TATGCCG681050.010.26435945-49
CGTATGC812950.08.65425245-49
TCGTATC835150.08.51102235-39
CTCGTAT764900.08.48887340-44
TCTCGTA809650.07.98746440-44
AGAGCAC4537100.07.91172177
AGCACAC4847700.07.53343449
TATCTCG886350.07.392748440-44
ATGCCGT984150.07.334350645-49
GAGCACA5029000.07.26612578
GTCACGA987800.07.26504525-29
GAAGAGC5138350.07.1495325
TGCCGTC1006450.07.03791145-49
GCCGTCT1054000.06.809976650-54
ATTCGTA1075950.06.78136135-39
TCGTATG961250.06.73830540-44
CGAATTC1181250.06.31701130-34
Produced by FastQC (version 0.11.5)