FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478478992
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1564850.020.984419
GAGCGTC1973550.016.7966238
ATCGGAA2163300.015.4673491
TCGGAAG2326000.014.4421312
AGAGCGT2321100.014.4257127
CGGAAGA2554400.013.231153
AAGAGCG2765550.012.2370076
CGCCGTA820000.08.32652655-59
TCGCCGT976650.07.13196855-59
GCCGTAT1056750.06.716181355-59
GAAGAGC5913600.06.23043975
GTCGCCG1137600.06.187897755-59
CCGTATC1181400.05.938854755-59
CGTATCA1251350.05.823626560-64
TGGTCGC1255400.05.70403450-54
GTGGTCG1377400.05.32194350-54
GGTCGCC1324300.05.26278250-54
Produced by FastQC (version 0.11.5)