FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447542316
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1225050.030.149431
TCGGAAG1358800.027.1767062
CGGAAGA1586650.023.3471553
CGCGCAT505450.014.72051635-39
TCGCGCA528050.014.20031835-39
TCTCGCG568200.013.3576630-34
TATGCCG643350.012.10190545-49
GCGCATC675300.011.31646635-39
CTCGCGC736700.010.19028530-34
CGTATGC768500.010.15752745-49
AGAGCAC4116350.09.60683257
CTCGTAT708200.09.41308340-44
AGCACAC4454900.08.954659
GAGCACA4521700.08.8319938
TCTCGTA750550.08.80467940-44
GAAGAGC4628750.08.6917785
ATGCCGT931450.08.57978645-49
ACTCTCG932600.08.51456130-34
TGCCGTC914650.08.38230245-49
GCCGTCT962050.08.14423350-54
Produced by FastQC (version 0.11.5)