FastQCFastQC Report
Tue 19 Apr 2022
EGAF00004973615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447542316
Sequences flagged as poor quality0
Sequence length151
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1184550.031.1130319
GAGCGTC1547600.024.0068368
ATCGGAA1735300.021.8807891
TCGGAAG1877250.020.1575162
AGAGCGT1918300.019.5950227
CGGAAGA2131500.017.8755323
AAGAGCG2336750.016.2257216
CGCCGTA640350.012.01704755-59
TCGCCGT764800.010.16017655-59
GCCGTAT877400.09.03307755-59
GTCGCCG881800.08.89429455-59
TGGTCGC1006150.07.99942350-54
GAAGAGC5195150.07.8817085
CCGTATC1003600.07.754184755-59
GGTCGCC1059900.07.42825650-54
CGTATCA1094600.07.416822460-64
GTGGTCG1111950.07.309997650-54
GCGTCGT1118000.06.886256710-14
CAGTACG1131650.06.78701530-34
CGTCGTG1170450.06.61979610-14
Produced by FastQC (version 0.11.5)