FastQCFastQC Report
Tue 14 May 2024
EGAF00004973908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004973908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59311115
Total Bases7.4 Gbp
Sequences flagged as poor quality0
Sequence length126
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT984610.1660076698945889No Hit
CTTATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGT958440.16159534346976953No Hit
ATACACATCTCCGAGCCCACGAGACGCTCATGAATCTCGTATGCCGTCTT623120.1050595659852289TruSeq Adapter, Index 8 (95% over 22bp)

[FAIL]Adapter Content

Adapter graph