FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004974318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004974318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3374127
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGATC9653.348642E-48.2072533
GCGCGAT9753.7417436E-48.1230762
ACCGCGC11050.00142435857.1674211
GGCGCGA11800.00284775566.71186451
AAGTCGG4208.3869236E-76.5142856140-144
GCTCACG29805.2694304E-85.7986582
GCGATCT20101.2660923E-45.73134334
ACTTAAC21455.255441E-55.70629361
CTCACGC28507.9823803E-75.55789473
TAAGTCG3150.0091667725.4857144140-144
CGATCTC31651.0658132E-65.2322285
Produced by FastQC (version 0.11.5)