FastQCFastQC Report
Fri 24 May 2024
EGAF00004975263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004975263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1290246
Total Bases5.6 Gbp
Sequences flagged as poor quality0
Sequence length1-143910
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)