FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004976226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004976226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20530176
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1737495584.6313007740411No Hit
TGCCCTATTGTTACTGTTGATGGATACGTGGACCCTTCTGGAGGAGATCG396540.19314982979200956No Hit
CACTATGTTCAGGAGACCCCACTCATGTTTAGCAGATGTACTTCTGTCAG346870.16895617455982842No Hit
TTTCTGTCATCCAAATACTCCACACGCAAATTTCCTTCCACTCGGATAAG207420.10103176904084991No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)