FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004976240

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004976240
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9202571
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN730690779.40071312679902No Hit
GTCTTCCAGTGTGATGATGGTGAGGATGGGCCTCCGGTTCATGCCGCCCA517740.5626036463071027No Hit
GTCATGTGCTGTGACTGCTTGTAGATGGCCATGGCGCGGACGCGGGTGCC140190.152337862973293No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)