FastQCFastQC Report
Wed 11 May 2022
EGAF00004976717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004976717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences306251034
Sequences flagged as poor quality0
Sequence length8
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCACGCT11320378036.96437478803745No Hit
AAGGGTGA7231661223.61350786492365No Hit
CGTTAATC6472762021.135478027479902No Hit
TTACTCAG4921331316.069598968276463No Hit
NCCACGCT9447830.30849952983342416No Hit
ACCACGCT8295910.27088594254346254No Hit
NAGGGTGA6001550.19596831793880573No Hit
NGTTAATC5367030.17524936748458456No Hit
NTACTCAG4077910.13315579532051475No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)