Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004976730 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 400459655 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCGCTG | 93254999 | 23.286989796762423 | No Hit |
TCCAATGC | 80851321 | 20.189629589527563 | No Hit |
GTAGCACA | 67688712 | 16.90275441105297 | No Hit |
CGTTTGAT | 52125208 | 13.016344430501995 | No Hit |
AAGCGCCG | 19556485 | 4.883509426186765 | No Hit |
AAGCGCAG | 12163859 | 3.037474274405995 | No Hit |
AAGCGCGG | 10498009 | 2.621489797767518 | No Hit |
GGAGCACA | 9093189 | 2.270687917363361 | No Hit |
GAAGCACA | 6992326 | 1.7460750197170298 | No Hit |
GCAGCACA | 6289013 | 1.5704485886349775 | No Hit |
GCCAATGC | 5341954 | 1.3339556015948721 | No Hit |
TCCAAAGC | 4608345 | 1.1507638640901292 | No Hit |
ACCAATGC | 3379771 | 0.8439729090811907 | No Hit |
TCCAACGC | 3137513 | 0.7834779261346564 | No Hit |
CCCAATGC | 2786853 | 0.6959135496433467 | No Hit |
CGTTTGAG | 2520224 | 0.6293328100679705 | No Hit |
CGTGTGAT | 2327398 | 0.581181642380429 | No Hit |
TCCAAGGC | 2133446 | 0.532749297803795 | No Hit |
CGGTTGAT | 1941474 | 0.4848113850570041 | No Hit |
CGTTCGAT | 1730390 | 0.432100956587 | No Hit |
CGTTGGAT | 1677322 | 0.4188491846950225 | No Hit |
CGATTGAT | 1353590 | 0.33800908108957944 | No Hit |
CGTTTGAA | 1283265 | 0.32044801117356003 | No Hit |
CGCTTGAT | 1027990 | 0.25670251351537526 | No Hit |
CGTTTGAC | 937580 | 0.23412595708299255 | No Hit |
CGTCTGAT | 703984 | 0.1757939885354993 | No Hit |
GTACCACA | 672871 | 0.16802466655473697 | No Hit |
NCCAATGC | 578390 | 0.14443152831463135 | No Hit |
NAGCGCTG | 574079 | 0.14335501537601833 | No Hit |
CGTATGAT | 562857 | 0.1405527355808165 | No Hit |
CGTTAGAT | 528111 | 0.13187620610620562 | No Hit |
NTAGCACA | 425886 | 0.10634929004271355 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)