FastQCFastQC Report
Fri 22 Jul 2022
EGAF00004977247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004977247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364002077
Sequences flagged as poor quality0
Sequence length74
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCT11577370.318057800532825No Hit
GCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTT10116410.2779217658145396No Hit
GTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAAT9814160.26961824176624133No Hit
GGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACA9525240.26168092441956037No Hit
GTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTA8860710.24342470990900417No Hit
GCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTA8750050.24038461736579597No Hit
GTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCC6731660.1849346590404208No Hit
GTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCC6343380.17426768693959951No Hit
AAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCCAAGGC6280170.1725311583867693No Hit
GGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAG6061960.16653641237327335No Hit
GCAACAACAAGTACGCGGCCAGCAGCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGC6042410.16599932752581517No Hit
GGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCC5959750.16372846136259822No Hit
AGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCT5902890.16216638236380174No Hit
GAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGG5858930.16095869694721548No Hit
ATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCA5830490.1601773827241101No Hit
GTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCT5736330.15759058429768244No Hit
CCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGT5660970.15552026644067746No Hit
GCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAAC5641130.15497521460571229No Hit
GCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAG5466900.15018870345621682No Hit
AGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGAT5465340.15014584655790303No Hit
CTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACA5372810.14760382809573913No Hit
GCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCC5301680.14564971836685425No Hit
GGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGG5109280.14036403424148594No Hit
GGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGC5078680.1395233796976384No Hit
GCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGC5070500.1392986557051981No Hit
CACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCC5018800.13787833413928569No Hit
GGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGA4697410.12904898891552205No Hit
GAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTC4691280.12888058328304539No Hit
CTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCCAAG4667440.12822564196522426No Hit
CTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGT4468630.12276385994357938No Hit
GACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATC4280960.11760812013168814No Hit
GTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAG4216310.11583203136502983No Hit
GAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGG4116650.1130941348996753No Hit
GTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCT4075900.11197463579308094No Hit
GGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACC4003830.10999470203572492No Hit
GCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAG3976240.10923673932772641No Hit
AAACAAAGCAACAACAAGTACGCGGCCAGCAGCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAG3859440.10602796642833441No Hit
AGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAG3850140.10577247338069448No Hit
GCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCC3818180.1048944564126759No Hit
GTGGAGACCACCACACCCTCCAAACAAAGCAACAACAAGTACGCGGCCAGCAGCTATCTGAGCCTGACGCCTGA3779770.10383924265355221No Hit
AGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATA3770200.1035763320658195No Hit
GCTCCGTGATGCATGAGGCTCTGCACAACCACTACACGCAGAAGAGCCTCTCCCTGTCTCCGGGTAAATGAGTG3739580.10273512807455766No Hit
GCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGG3685380.10124612558186033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)