FastQCFastQC Report
Mon 30 May 2022
EGAF00004977257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004977257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences385796323
Sequences flagged as poor quality0
Sequence length74
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCT9763360.25307032280864944No Hit
GCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTT8659560.22445937101375638No Hit
GTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAAT8345600.2163213981694688No Hit
GGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACA7702060.19964057563088802No Hit
GTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTA7346210.19041679668885803No Hit
GCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTA7167080.18577367312025939No Hit
GTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCC5923660.1535437132717307No Hit
GTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCC5865830.15204473579184424No Hit
GGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCC5517450.14301458233442002No Hit
AAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCCAAGGC5355200.13880899533612195No Hit
GTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCT5287680.13705884905491958No Hit
GCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAAC5243800.1359214613354415No Hit
GGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAG5239040.1357980801698828No Hit
ATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCA5008810.12983042350043342No Hit
AGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGAT4996400.1295087511759411No Hit
GAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGG4901180.1270406094565085No Hit
CCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGT4747350.12305327233510206No Hit
GGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGC4694850.12169245065614583No Hit
GGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGG4596230.1191361795327427No Hit
CACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCC4571160.11848635478052495No Hit
GAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTC4404740.11417267966029837No Hit
GCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAG4392850.11386448595053095No Hit
GCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCC4372340.11333285828128538No Hit
AGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGCACCGTGGAGAAGACAGTGGCCCCT4325660.1121228934055963No Hit
GGAGCACCGTGGAGAAGACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGA4322590.11204331773789353No Hit
GACAGTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATC4106020.10642973390910207No Hit
CTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAGGGGAGGGGTCTCTCCTCCCACCCCAAG4078960.10572832753514864No Hit
GTGGCCCCTACAGAATGTTCATAGGTTCTAAACCCTCACCCCCCCCACGGGAGACTAGAGCTGCAGGATCCCAG3997890.1036269596587109No Hit
GCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGCTGCCAGGTCACGCATGAAGGGAGC3969420.10288900550252263No Hit
GCAACAACAAGTACGCGGCCAGCAGCTATCTGAGCCTGACGCCTGAGCAGTGGAAGTCCCACAGAAGCTACAGC3907010.10127131253140534No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)