FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004977710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004977710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41670276
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG57550.011.083281140-144
GATCGGA42200.010.440443140-144
TAGATCG32900.08.271339140-144
Produced by FastQC (version 0.11.5)