EGAF00004977954 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004977954
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11097241
Sequences flagged as poor quality	0
Sequence length	75
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	25331	0.22826394416413953	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACG	24493	0.22071251764289881	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAA	16907	0.15235318400312292	No Hit
GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAA	12332	0.11112672059658793	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCG	12235	0.11025262945988105	No Hit
ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAAC	12070	0.10876577340259619	No Hit
CTCTAGGACTGGCCAGTGGGTGTTCTAGAGGCCAGCTGGGGTTGGAAGACAATGGTCTGGACACTTCACTGGGTG	11670	0.1051612738697844	No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG	11321	0.10201634802740608	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	12375	43.628708	1
GGTATCA	4870	39.465973	1
TCTAGCG	2385	31.817396	28
CTAGCGG	2505	30.155512	29
CGCAATA	2595	29.242971	36
ATCAACG	18765	28.896555	3
AATACGA	2625	28.514431	39
TCAACGC	19190	28.328485	4
AAAGTCG	5295	27.751204	59
CAACGCA	19725	27.718143	5
AGGTTCG	5380	27.696817	67
GAACGAA	5350	27.207893	54
CAATACG	2765	27.070786	38
ACGAAAG	5350	27.014471	56
AGAACGA	5595	26.324615	53
ATTAATC	5835	25.951815	45
TATCAAC	20920	25.905024	2
AGTCGGA	5760	25.870064	61
AACGCAG	21100	25.846706	6
ATACGAA	2905	25.76605	40