EGAF00004978283 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004978283
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10334508
Sequences flagged as poor quality	0
Sequence length	75
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA	26428	0.2557257684642559	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACG	26308	0.2545646101391571	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAA	19332	0.18706260617341433	No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCG	12506	0.1210120501140451	No Hit
GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAA	12289	0.11891228880949146	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12128	0.11735440138998393	No Hit
CTCTAGGACTGGCCAGTGGGTGTTCTAGAGGCCAGCTGGGGTTGGAAGACAATGGTCTGGACACTTCACTGGGTG	11035	0.10677818431220915	No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCG	10728	0.10380755426383144	No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACC	10485	0.10145620865550638	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	7265	49.267845	1
GTATCAA	19815	45.035603	1
TCTAGCG	2150	30.95861	28
ACGAAAG	4605	30.780888	56
CTAGCGG	2175	30.763264	29
AAAGTCG	4605	30.706589	59
ATCAACG	29195	30.682682	3
GAACGAA	4605	30.631102	54
TCAACGC	29600	30.238832	4
CAACGCA	30405	29.445728	5
TATCAAC	30690	29.324186	2
AGTCGGA	4870	29.177189	61
ATTAATC	4900	29.006414	45
AGAACGA	4880	28.975214	53
AGGTTCG	4995	28.308254	67
CGCAATA	2365	28.013548	36
AATACGA	2430	27.691425	39
AACGCAG	32835	27.286901	6
AAGTCGG	5400	26.441496	60
AACGAAA	5585	25.441269	55