FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7628064
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG323900.4246162591189586No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATACGAC7900.001364600710.974253145
AGGGGGG248400.09.2632211
CGTCGTG19701.7921753E-57.701474145
GTAAGTT53601.26146915E-85.458974145
Produced by FastQC (version 0.11.5)