FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10472247
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG145150.13860444659107066No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTTACG18100.00415881546.4737873145
GAATGCG24250.00227794425.7105236145
AAATCGA28404.235264E-65.33472544
GTGCTCG46007.497274E-75.326161145
Produced by FastQC (version 0.11.5)