FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978445

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978445
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8377006
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGACG11550.00419612288.209469145
GTCGATT8850.00126538598.1533111
AACCCGC22450.00686469265.63144145
GTTAATT53355.456968E-125.13956641
Produced by FastQC (version 0.11.5)