FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978467

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978467
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7797370
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAT53600.05.52719971
AATTTAC55100.05.2455925
GTTACAT36351.0496478E-75.1683871
GTAAAAT78300.05.16787861
GTCAAAT46252.8921932E-105.1557081
Produced by FastQC (version 0.11.5)