FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8557495
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGGGGG182700.08.6773111
AGGGGGG89050.08.5777421
GTTCGGA15752.0201271E-46.40543271
GGATCGG23250.00109453846.0713496145
Produced by FastQC (version 0.11.5)