FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8831621
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGTTG19500.00220105456.2368746145
CGGGGGG225850.05.3849473145
AGGTCCG34908.2740786E-55.2271795145
GTGAAAT92950.05.05180641
Produced by FastQC (version 0.11.5)