FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8281618
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG126460.15269962946854104No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGAGCG17350.0027851196.726278145
GTGTTCG22459.496824E-46.1433973145
ACGCGGG35204.595047E-55.4251456145
AACACGC26750.0075963875.1558604145
GTTCAAC44152.4374458E-95.07113841
Produced by FastQC (version 0.11.5)