FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8459909
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGACGC23652.5404507E-46.2929773145
CACGAAT21000.00295734366.0746493145
GGATCGG27653.0021038E-45.7670727145
AGGGGGG104950.05.68366531
GCGCACC62552.7284841E-115.60849145
TTGGGCG31400.00165388775.07833145
Produced by FastQC (version 0.11.5)