FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6596041
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGAACT12600.00789557.6511974145
GTTCAAT33203.583409E-106.09021471
GTTTAAT47051.6370905E-115.37181571
GTTTAAG32351.5517307E-65.13412241
GCTAAAT31655.561051E-65.0195141
Produced by FastQC (version 0.11.5)