FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7806892
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG120260.15404337603235704No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAC33251.4624675E-85.6439781
GCGACAT17450.00464226265.3771421
GGCTAAT31851.1516604E-65.2122111
Produced by FastQC (version 0.11.5)