FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9002555
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG122950.07.2071011
GATCGGC25151.1328627E-46.193599145
GTCGTCG27154.9040624E-56.1198378145
TGGGGGG232100.06.05262141
GGATCGG28208.503572E-55.891972145
Produced by FastQC (version 0.11.5)