FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10344891
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG949350.05.450771145
GGGATCG33804.3530922E-45.256561145
GTTTAAT62900.05.01906541
Produced by FastQC (version 0.11.5)