FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9798751
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCGG24605.4965712E-67.1005564145
CACGACT26106.41074E-45.8559194145
CCTACGG25000.00244358865.676895145
AGACGAC23750.0086257545.5160117145
GCGAAAC17100.0036853235.48349141
GTTTAGG44505.7480065E-105.18680431
GTTGCCG27550.0076732415.151448145
TGGGGGG188150.05.09867531
Produced by FastQC (version 0.11.5)