FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7960189
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCGG21455.7298166E-109.824907145
AATCGTG14756.5662636E-46.33414555
GTTTAAA71800.05.70537761
GCTTAAC21806.9153524E-55.6043651
GTCCTAT26356.934113E-65.45485641
GGTCGAT18700.00187699795.3804721