FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6956377
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGG9600.0090168658.733748145
AACTAGG21200.00155671525.1016256
GTTTTTT123500.05.02111531
Produced by FastQC (version 0.11.5)