FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6580531
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTTCG12558.565574E-57.479796
GACTAAG18700.00176837715.40596151
GGCAATT34351.7236198E-75.25532771
Produced by FastQC (version 0.11.5)