FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004978823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004978823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9293073
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGTC16150.00120947847.2790136145
GCGCAAA21957.3391246E-55.58243751
GTTTTTT119700.05.5399161
GTTCAAT43102.4556357E-105.35158251
GTTCAAA60750.05.2205461
Produced by FastQC (version 0.11.5)